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Intron Name: Anas_platyrhynchos_platyrhynchos_11_8314255_8316808_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8314255 - 8316808

Intron Length:

2554

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTTTG

5'SS Class:

strong_major

3'SS Sequence:

ATCTTTTGGTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAA

U12 Branch Point Sequence:

TATTTGTTATCT

Flanking Amino Acid:

AREDAARERARDREERLAAL

Intron Amino Acid Position:

680

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

1.1

78.8

38.3

Major BPS

77.5

0.68

0.8

76.2

24.6

Major PPT

67.7

0.4

1.1

69.6

Minor 5ss

49.4

-0

2.5

66.9

44.4

Minor BPS

55.6

0.25

2.3

80.51

41.4

Associated Gene:

Gene:

SCAPER

Ensembl Gene ID:

ENSAPLG00000014716

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015367

8204332 - 8358959

154628