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Intron Name: Anas_platyrhynchos_platyrhynchos_11_8320254_8322235_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8320254 - 8322235

Intron Length:

1982

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

TGATTATTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTTTCTTATACT

Flanking Amino Acid:

VKKAQEEEAKVNEIAFINTL

Intron Amino Acid Position:

581

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.13

0.6

93.1

14.6

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

0.67

0.9

73.9

40.4

Minor 5ss

41.9

-0.9

2.9

57.8

46.8

Minor BPS

64.5

0.54

87.77

37.8

Associated Gene:

Gene:

SCAPER

Ensembl Gene ID:

ENSAPLG00000014716

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015367

8204332 - 8358959

154628