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Intron Name: Anas_platyrhynchos_platyrhynchos_11_8322377_8323384_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8322377 - 8323384

Intron Length:

1008

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGCCTT

5'SS Class:

strong_major

3'SS Sequence:

TAATTACATATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTAAT

U12 Branch Point Sequence:

AATTCAGTAATT

Flanking Amino Acid:

TLKLQKLMEREKDVRKWKEE

Intron Amino Acid Position:

534

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

72.7

44.5

Major BPS

76.6

0.66

1.1

75.9

36.3

Major PPT

0.36

59.9

40.6

Minor 5ss

43.4

-0.7

3.2

57.4

46.8

Minor BPS

53.3

0.18

2.2

76.94

39.5

Associated Gene:

Gene:

SCAPER

Ensembl Gene ID:

ENSAPLG00000014716

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015367

8204332 - 8358959

154628