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Intron Name: Anas_platyrhynchos_platyrhynchos_11_8323497_8323814_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8323497 - 8323814

Intron Length:

318

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCTTAGAA

5'SS Class:

weak_major

3'SS Sequence:

TTTTAATTAAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GTGTTTTTAATT

Flanking Amino Acid:

HEKLSSPSRKRTIAESKKKH

Intron Amino Acid Position:

496

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.1

0.19

1.3

56.8

36.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

67.4

0.39

1.1

69.1

39.8

Minor 5ss

31.3

-2.1

3.2

38.8

46.3

Minor BPS

72.2

0.78

1.1

79.65

37.1

Associated Gene:

Gene:

SCAPER

Ensembl Gene ID:

ENSAPLG00000014716

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015367

8204332 - 8358959

154628