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Intron Name: Anas_platyrhynchos_platyrhynchos_11_8327643_8332504_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8327643 - 8332504

Intron Length:

4862

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ATG|GCAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTAATGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATG

Flanking Amino Acid:

TPAQKSSRKNDRKDAEGWET

Intron Amino Acid Position:

246

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

84.1

33.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.72

0.8

79.2

33.1

Minor 5ss

-2.3

4.1

47.1

42.6

Minor BPS

0.74

1.1

78.3

32.8

Associated Gene:

Gene:

SCAPER

Ensembl Gene ID:

ENSAPLG00000014716

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015367

8204332 - 8358959

154628