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Intron Name: Anas_platyrhynchos_platyrhynchos_11_8374949_8377716_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8374949 - 8377716

Intron Length:

2768

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTGTT

5'SS Class:

strong_major

3'SS Sequence:

ATTTATTTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAC

U12 Branch Point Sequence:

TTTATTTTAAAG

Flanking Amino Acid:

PNNQGIAQEEAVHLIEEMDL

Intron Amino Acid Position:

159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.3

0.95

0.8

27.8

Major BPS

81.9

0.79

0.8

81.9

Major PPT

75.1

0.57

1.1

75.3

37.9

Minor 5ss

44.7

-0.6

3.2

66.4

45.1

Minor BPS

63.9

0.3

1.5

68.85

38.6

Associated Gene:

Gene:

RCN2

Ensembl Gene ID:

ENSAPLG00000014965

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015636

8368521 - 8377869

9349