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Intron Name: Anas_platyrhynchos_platyrhynchos_11_8405867_8460670_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8405867 - 8460670

Intron Length:

54804

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

TACTAACTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

ACTTCTTTAATA

Flanking Amino Acid:

WAALAFAAIQICTASKVNQS

Intron Amino Acid Position:

205

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

83.2

30.8

Major BPS

0.75

78.6

Major PPT

75.1

0.57

0.9

70.6

39.6

Minor 5ss

38.7

-1.3

2.8

48.1

47.6

Minor BPS

77.3

0.85

1.1

77.18

34.1

Associated Gene:

Gene:

TSPAN3

Ensembl Gene ID:

ENSAPLG00000015397

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028835

8405774 - 8478239

72466

ENSAPLT00000016061

8405774 - 8474206

68433