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Intron Name: Anas_platyrhynchos_platyrhynchos_11_8422818_8424755_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8422818 - 8424755

Intron Length:

1938

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGAAT

5'SS Class:

strong_major

3'SS Sequence:

GTGTTTCTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

TGTTTCTTACAG

Flanking Amino Acid:

RERQKEQRKKYESAMERMQK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

0.8

83.8

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

82.7

0.74

0.9

76.5

37.7

Minor 5ss

28.5

-2.5

3.1

38.7

46.6

Minor BPS

57.3

0.09

1.8

64.96

42.7

Associated Gene:

Gene:

PSTPIP1

Ensembl Gene ID:

ENSAPLG00000015226

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043512

8389689 - 8443827

54139

ENSAPLT00000015881

8389689 - 8442553

52865

ENSAPLT00000044835

8389894 - 8432264

42371