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Intron Name: Anas_platyrhynchos_platyrhynchos_11_8428889_8432241_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8428889 - 8432241

Intron Length:

3353

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAACATT

5'SS Class:

strong_major

3'SS Sequence:

TCTTCGGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTGAT

U12 Branch Point Sequence:

GCTACCTCACGT

Flanking Amino Acid:

WEQEHIKTCEVFQLQECDRI

Intron Amino Acid Position:

195

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

84.2

33.9

Major BPS

68.9

0.47

1.2

60.7

45.9

Major PPT

75.8

0.58

0.9

69.1

Minor 5ss

44.7

-0.6

3.1

45.2

Minor BPS

44.8

-0.3

2.1

61.54

47.7

Associated Gene:

Gene:

PSTPIP1

Ensembl Gene ID:

ENSAPLG00000015226

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043512

8389689 - 8443827

54139

ENSAPLT00000040676

8389894 - 8442553

52660

ENSAPLT00000015881

8389689 - 8442553

52865