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Intron Name: Anas_platyrhynchos_platyrhynchos_11_8432341_8433052_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8432341 - 8433052

Intron Length:

712

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGGGCA

5'SS Class:

major

3'SS Sequence:

TTCTGTTTTGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTACAT

U12 Branch Point Sequence:

ACATTCTTGACT

Flanking Amino Acid:

LSMQCVKDDELYEEVRVSLE

Intron Amino Acid Position:

228

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

66.7

39.1

Major BPS

73.9

0.59

30.2

Major PPT

84.4

0.77

0.7

80.5

31.5

Minor 5ss

28.1

-2.5

3.6

38.3

46.9

Minor BPS

0.74

1.2

77.51

Associated Gene:

Gene:

PSTPIP1

Ensembl Gene ID:

ENSAPLG00000015226

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043512

8389689 - 8443827

54139

ENSAPLT00000040676

8389894 - 8442553

52660

ENSAPLT00000015881

8389689 - 8442553

52865