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Intron Name: Anas_platyrhynchos_platyrhynchos_11_8440711_8442421_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8440711 - 8442421

Intron Length:

1711

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

TGTCTCCTCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAACCAT

U12 Branch Point Sequence:

CTCAGGCTAACC

Flanking Amino Acid:

YRVLYDYTAQNMDELDINEG

Intron Amino Acid Position:

345

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

83.2

30.8

Major BPS

57.8

0.19

1.3

67.1

39.2

Major PPT

79.9

0.67

0.8

77.3

31.4

Minor 5ss

38.7

-1.3

2.8

48.1

47.6

Minor BPS

39.1

-0.8

2.5

51.34

45.7

Associated Gene:

Gene:

PSTPIP1

Ensembl Gene ID:

ENSAPLG00000015226

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043512

8389689 - 8443827

54139

ENSAPLT00000040676

8389894 - 8442553

52660

ENSAPLT00000015881

8389689 - 8442553

52865