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Intron Name: Anas_platyrhynchos_platyrhynchos_11_8461154_8462251_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8461154 - 8462251

Intron Length:

1098

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGACTG

5'SS Class:

strong_major

3'SS Sequence:

TGTATGTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATCTTTTTAATC

Flanking Amino Acid:

SRAIDYVQRQLRCCGIHNYS

Intron Amino Acid Position:

126

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.9

71.5

40.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

80.5

0.69

0.9

41.9

Minor 5ss

30.1

-2.3

3.1

38.3

46.6

Minor BPS

70.4

0.62

1.1

71.5

34.3

Associated Gene:

Gene:

TSPAN3

Ensembl Gene ID:

ENSAPLG00000015397

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028835

8405774 - 8478239

72466

ENSAPLT00000019362

8455413 - 8478239

22827

ENSAPLT00000016061

8405774 - 8474206

68433

ENSAPLT00000036637

8395731 - 8478239

82509

ENSAPLT00000030516

8459727 - 8478239

18513