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Intron Name: Anas_platyrhynchos_platyrhynchos_11_8502343_8502485_R

Intron Information:

Intron Rank:

144711

Intron Class:

major

Intron Phase:

Intron Coordinates:

8502343 - 8502485

Intron Length:

143

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

TGCTGTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCCTCAA

U12 Branch Point Sequence:

GCTGCCTCAAGC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

85.9

23.9

Major BPS

55.4

0.13

1.2

59.5

Major PPT

81.8

0.72

0.9

75.5

38.4

Minor 5ss

29.7

-2.3

39.4

46.1

Minor BPS

48.9

-0.1

59.01

45.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025212

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038298

8501982 - 8503814

1833