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Intron Name: Anas_platyrhynchos_platyrhynchos_11_8542521_8593269_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

8542521 - 8593269

Intron Length:

50749

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTAAGTTAC

5'SS Class:

major

3'SS Sequence:

TTTTGTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

CCATTCTTATCC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

73.1

31.9

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

86.8

0.83

0.9

84.6

Minor 5ss

43.1

-0.8

2.8

58.5

40.5

Minor BPS

57.6

0.22

1.6

62.18

43.6

Associated Gene:

Gene:

PEAK1

Ensembl Gene ID:

ENSAPLG00000015599

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016253

8510979 - 8594104

83126