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Intron Name: Anas_platyrhynchos_platyrhynchos_11_8542521_8600587_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

8542521 - 8600587

Intron Length:

58067

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCTGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

CCATTCTTATCC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

73.2

39.3

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

86.8

0.83

0.9

84.6

Minor 5ss

44.2

-0.6

2.9

59.3

45.5

Minor BPS

57.6

0.22

1.6

62.18

43.6

Associated Gene:

Gene:

PEAK1

Ensembl Gene ID:

ENSAPLG00000015599

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039559

8510365 - 8617636

107272

ENSAPLT00000027036

8510643 - 8600820

90178