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Intron Name: Anas_platyrhynchos_platyrhynchos_11_8646066_8648498_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8646066 - 8648498

Intron Length:

2433

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTACTATTA

5'SS Class:

major

3'SS Sequence:

TTTTTTGTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTGAA

U12 Branch Point Sequence:

ACTCCCTGAAAC

Flanking Amino Acid:

WSKLPPEEKRRYLDEADRDK

Intron Amino Acid Position:

163

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.7

0.32

1.1

61.7

39.7

Major BPS

57.2

0.18

1.1

48.9

36.6

Major PPT

93.1

0.97

0.7

92.3

26.6

Minor 5ss

40.1

-1.1

3.3

47.5

47.9

Minor BPS

57.3

0.21

1.6

65.01

39.7

Associated Gene:

Gene:

HMG20A

Ensembl Gene ID:

ENSAPLG00000015603

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023398

8626624 - 8658917

32294

ENSAPLT00000021378

8643808 - 8653972

10165

ENSAPLT00000016280

8630270 - 8656469

26200