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Intron Name: Anas_platyrhynchos_platyrhynchos_11_8648632_8648973_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8648632 - 8648973

Intron Length:

342

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTGAAC

5'SS Class:

major

3'SS Sequence:

TTTTCTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTGTAT

U12 Branch Point Sequence:

TTCTTGGCGATT

Flanking Amino Acid:

DRQKGKSHRQDGARQPVHDH

Intron Amino Acid Position:

207

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.7

0.54

1.1

67.6

37.3

Major BPS

56.3

0.16

1.5

57.4

49.1

Major PPT

96.8

1.05

0.5

96.1

13.2

Minor 5ss

38.7

-1.3

3.1

51.2

45.6

Minor BPS

38.8

-0.8

2.6

61.78

43.3

Associated Gene:

Gene:

HMG20A

Ensembl Gene ID:

ENSAPLG00000015603

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023398

8626624 - 8658917

32294

ENSAPLT00000021378

8643808 - 8653972

10165

ENSAPLT00000016280

8630270 - 8656469

26200