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Intron Name: Anas_platyrhynchos_platyrhynchos_11_8653201_8653828_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8653201 - 8653828

Intron Length:

628

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGACTT

5'SS Class:

strong_major

3'SS Sequence:

ATGTTGTCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAA

U12 Branch Point Sequence:

CTCATTTTACTA

Flanking Amino Acid:

TTSFAGVPLPGSGETPTMET

Intron Amino Acid Position:

315

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.3

0.8

84.6

33.3

Major BPS

76.5

0.66

0.8

75.9

24.9

Major PPT

72.4

0.51

0.9

66.7

Minor 5ss

37.9

-1.4

3.3

56.5

47.6

Minor BPS

47.9

-0.1

1.6

54.23

39.7

Associated Gene:

Gene:

HMG20A

Ensembl Gene ID:

ENSAPLG00000015603

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021378

8643808 - 8653972

10165

ENSAPLT00000016280

8630270 - 8656469

26200

ENSAPLT00000023398

8626624 - 8658917

32294