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Intron Name: Anas_platyrhynchos_platyrhynchos_11_8653973_8656372_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

8653973 - 8656372

Intron Length:

2400

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

GTTTCGTATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAC

U12 Branch Point Sequence:

ACTCCTCTAACG

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

78.8

35.5

Major BPS

72.3

0.55

73.3

28.9

Major PPT

75.8

0.58

69.9

40.6

Minor 5ss

34.9

-1.7

3.2

42.4

44.3

Minor BPS

53.8

-0

1.8

59.92

41.8

Associated Gene:

Gene:

HMG20A

Ensembl Gene ID:

ENSAPLG00000015603

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023398

8626624 - 8658917

32294

ENSAPLT00000016280

8630270 - 8656469

26200