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Intron Name: Anas_platyrhynchos_platyrhynchos_11_8716860_8717363_F

Intron Information:

Intron Rank:

136370

Intron Class:

major

Intron Phase:

Intron Coordinates:

8716860 - 8717363

Intron Length:

504

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGATTTTC

5'SS Class:

strong_major

3'SS Sequence:

CCTTTCTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATGAA

U12 Branch Point Sequence:

GAATTATGAAGC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

80.2

28.1

Major BPS

75.5

0.63

40.9

Major PPT

85.5

0.8

0.6

84.4

23.5

Minor 5ss

39.4

-1.2

2.9

52.6

44.6

Minor BPS

44.2

-0.4

1.9

51.37

38.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023485

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047150

8716665 - 8724560

7896