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Intron Name: Anas_platyrhynchos_platyrhynchos_11_873601_889587_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

873601 - 889587

Intron Length:

15987

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTGGAGC

5'SS Class:

major

3'SS Sequence:

TCCTGTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTCAC

U12 Branch Point Sequence:

TGCTGCTGAAAT

Flanking Amino Acid:

CSPSAARRVQVVKQCCHKGS

Intron Amino Acid Position:

129

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

65.6

40.1

Major BPS

76.2

0.65

0.9

77.4

26.5

Major PPT

83.9

0.76

0.8

75.9

Minor 5ss

33.3

-1.9

3.1

42.5

44.6

Minor BPS

50.2

0.09

71.05

45.2

Associated Gene:

Gene:

SEMA6D

Ensembl Gene ID:

ENSAPLG00000009360

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038721

873217 - 902149

28933

ENSAPLT00000027125

873217 - 902149

28933