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Intron Name: Anas_platyrhynchos_platyrhynchos_11_8774691_8798098_F

Intron Information:

Intron Rank:

149263

Intron Class:

major

Intron Phase:

Intron Coordinates:

8774691 - 8798098

Intron Length:

23408

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGCAGA

5'SS Class:

strong_major

3'SS Sequence:

TCCTCTGTTGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTGTAT

U12 Branch Point Sequence:

CTGTGCTGACCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

74.1

38.4

Major BPS

58.9

0.22

1.5

59.6

46.8

Major PPT

76.9

0.61

0.8

72.4

32.3

Minor 5ss

33.3

-1.9

2.8

45.7

Minor BPS

47.4

-0.1

2.2

68.2

48.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030266

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036928

8749492 - 8801232

51741

ENSAPLT00000027257

8774388 - 8801232

26845