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Intron Name: Anas_platyrhynchos_platyrhynchos_11_8809635_8820344_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

8809635 - 8820344

Intron Length:

10710

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGAG

5'SS Class:

strong_major

3'SS Sequence:

CCGTTGCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCACAT

U12 Branch Point Sequence:

TCACATCCAGCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

72.3

39.5

Major BPS

65.3

0.38

1.1

72.6

33.1

Major PPT

72.5

0.51

0.9

65.3

36.2

Minor 5ss

30.6

-2.2

3.4

39.1

46.7

Minor BPS

37.6

-0.8

1.9

52.6

41.7

Associated Gene:

Gene:

LINGO1

Ensembl Gene ID:

ENSAPLG00000011471

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023887

8807781 - 8820665

12885