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Intron Name: Anas_platyrhynchos_platyrhynchos_11_8809635_8849096_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

8809635 - 8849096

Intron Length:

39462

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAGGTGAC

5'SS Class:

major

3'SS Sequence:

CCGTTGCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCACAT

U12 Branch Point Sequence:

TCACATCCAGCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.1

66.7

39.6

Major BPS

65.3

0.38

1.1

72.6

33.1

Major PPT

72.5

0.51

0.9

65.3

36.2

Minor 5ss

31.1

-2.2

3.4

34.1

42.2

Minor BPS

37.6

-0.8

1.9

52.6

41.7

Associated Gene:

Gene:

LINGO1

Ensembl Gene ID:

ENSAPLG00000011471

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011934

8807781 - 8852831

45051