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Intron Name: Anas_platyrhynchos_platyrhynchos_11_895186_895289_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

895186 - 895289

Intron Length:

104

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTACGGCCC

5'SS Class:

major

3'SS Sequence:

TTTCTCTTGCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTCTCTTGCAAG

Flanking Amino Acid:

SRCERHGSCKKACIASRDPY

Intron Amino Acid Position:

523

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.7

0.42

1.1

38.9

Major BPS

90.4

0.7

90.2

19.3

Major PPT

70.5

0.46

1.1

71.6

38.5

Minor 5ss

32.7

-2

3.5

42.9

38.3

Minor BPS

46.4

-0.4

2.1

57.05

44.5

Associated Gene:

Gene:

SEMA6D

Ensembl Gene ID:

ENSAPLG00000009360

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027125

873217 - 902149

28933

ENSAPLT00000009805

827474 - 902149

74676

ENSAPLT00000043123

873089 - 902149

29061

ENSAPLT00000042811

873089 - 902149

29061

ENSAPLT00000038721

873217 - 902149

28933