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Intron Name: Anas_platyrhynchos_platyrhynchos_11_8959469_8960253_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8959469 - 8960253

Intron Length:

785

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGGTACC

5'SS Class:

major

3'SS Sequence:

TCCTTCCCCCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

CGGTGCTGACCC

Flanking Amino Acid:

LLQLRAGTLQARLRLGSEEV

Intron Amino Acid Position:

103

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.57

1.2

70.9

39.4

Major BPS

66.3

0.4

1.1

41.8

Major PPT

65.9

0.36

31.6

Minor 5ss

-2.1

2.7

38.2

39.5

Minor BPS

43.7

-0.5

2.1

51.46

45.5

Associated Gene:

Gene:

CSPG4

Ensembl Gene ID:

ENSAPLG00000020991

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026379

8959163 - 8969983

10821