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Intron Name: Anas_platyrhynchos_platyrhynchos_11_8964917_8966553_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8964917 - 8966553

Intron Length:

1637

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGGG

5'SS Class:

strong_major

3'SS Sequence:

CCCCGTCCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTACAG

U12 Branch Point Sequence:

GGGGTTACAGCC

Flanking Amino Acid:

PRLRINAGLQLRSGATATIG

Intron Amino Acid Position:

1471

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

67.8

43.5

Major BPS

46.4

-0.2

1.6

60.7

45.9

Major PPT

66.5

0.37

0.8

56.8

33.5

Minor 5ss

28.6

-2.5

3.5

37.8

47.1

Minor BPS

35.3

-1.1

1.7

36.36

Associated Gene:

Gene:

CSPG4

Ensembl Gene ID:

ENSAPLG00000020991

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026379

8959163 - 8969983

10821