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Intron Name: Anas_platyrhynchos_platyrhynchos_11_896692_900845_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

896692 - 900845

Intron Length:

4154

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTTAGTTTT

5'SS Class:

major

3'SS Sequence:

ATGTCTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATGAT

U12 Branch Point Sequence:

TACATGTAAATT

Flanking Amino Acid:

DYKIFGDPTSGVRWEVQSGE

Intron Amino Acid Position:

687

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

1.1

81.7

32.3

Major BPS

84.6

0.86

41.2

Major PPT

82.8

0.74

0.9

77.3

36.3

Minor 5ss

42.6

-0.8

2.8

57.1

41.4

Minor BPS

43.8

-0.3

2.2

60.66

43.7

Associated Gene:

Gene:

SEMA6D

Ensembl Gene ID:

ENSAPLG00000009360

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042811

873089 - 902149

29061