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Intron Name: Anas_platyrhynchos_platyrhynchos_11_8967003_8967096_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8967003 - 8967096

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTAGG

5'SS Class:

strong_major

3'SS Sequence:

GCGTGTTTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGTTGAT

U12 Branch Point Sequence:

GCAGGGTTGATG

Flanking Amino Acid:

ARKQSLTLCPGALQPLTSEN

Intron Amino Acid Position:

1581

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

68.8

43.8

Major BPS

63.5

0.33

1.4

57.1

49.4

Major PPT

74.5

0.55

64.9

45.7

Minor 5ss

28.3

-2.5

2.8

32.9

42.1

Minor BPS

36.8

-1.1

2.3

34.81

40.7

Associated Gene:

Gene:

CSPG4

Ensembl Gene ID:

ENSAPLG00000020991

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026379

8959163 - 8969983

10821