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Intron Name: Anas_platyrhynchos_platyrhynchos_11_8967252_8967522_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8967252 - 8967522

Intron Length:

271

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGTCT

5'SS Class:

strong_major

3'SS Sequence:

TCTCCCCTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGCCAT

U12 Branch Point Sequence:

TGAAGCAGAAAT

Flanking Amino Acid:

DEVRNFTQAQVDGGVIFYQH

Intron Amino Acid Position:

1633

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.8

78.2

31.9

Major BPS

62.2

0.3

1.4

72.5

43.5

Major PPT

73.6

0.53

0.7

65.7

30.2

Minor 5ss

33.9

-1.8

3.3

47.6

Minor BPS

40.8

-0.6

2.1

58.39

43.2

Associated Gene:

Gene:

CSPG4

Ensembl Gene ID:

ENSAPLG00000020991

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026379

8959163 - 8969983

10821