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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9006984_9008316_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9006984 - 9008316

Intron Length:

1333

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTTGTCTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTGAT

U12 Branch Point Sequence:

CTTCCCCTGATG

Flanking Amino Acid:

IQYSVTPSYQVSAVPQSSGS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

36.6

Major BPS

66.4

0.41

1.1

56.9

40.5

Major PPT

81.4

0.71

0.8

73.7

36.9

Minor 5ss

36.9

-1.5

3.2

48.2

47.9

Minor BPS

52.1

-0

1.8

60.83

41.3

Associated Gene:

Gene:

SIN3A

Ensembl Gene ID:

ENSAPLG00000012706

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013265

9006763 - 9030340

23578