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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9014674_9016000_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9014674 - 9016000

Intron Length:

1327

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGATTC

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTCCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTCAC

U12 Branch Point Sequence:

CTCACCTCGAGA

Flanking Amino Acid:

VGTESLFFEKVRKALRSTEA

Intron Amino Acid Position:

471

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

81.1

26.4

Major BPS

76.2

0.65

0.9

77.4

26.5

Major PPT

80.3

0.68

0.7

72.9

Minor 5ss

37.1

-1.5

3.2

49.9

46.6

Minor BPS

46.3

-0.3

1.9

55.12

43.9

Associated Gene:

Gene:

SIN3A

Ensembl Gene ID:

ENSAPLG00000012706

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013265

9006763 - 9030340

23578