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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9019904_9020621_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9019904 - 9020621

Intron Length:

718

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGGGG

5'SS Class:

strong_major

3'SS Sequence:

CCATTCCCTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

CTCTGCCTAACG

Flanking Amino Acid:

IYRCEDERFELDVVLETNLA

Intron Amino Acid Position:

620

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

67.8

43.5

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

77.2

0.61

0.8

73.7

31.1

Minor 5ss

28.6

-2.5

3.5

37.8

47.1

Minor BPS

49.1

-0.2

2.2

59.61

47.9

Associated Gene:

Gene:

SIN3A

Ensembl Gene ID:

ENSAPLG00000012706

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013265

9006763 - 9030340

23578