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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9023644_9025002_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9023644 - 9025002

Intron Length:

1359

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGACTGCC

5'SS Class:

major

3'SS Sequence:

CTCCTTTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CGCTCAC

U12 Branch Point Sequence:

CGCTCACGAACA

Flanking Amino Acid:

DKLIQSIVRQLQHIVSDEIC

Intron Amino Acid Position:

1009

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

1.1

69.3

35.8

Major BPS

57.5

0.19

1.1

60.7

37.6

Major PPT

87.7

0.85

0.7

83.2

25.1

Minor 5ss

34.1

-1.8

3.1

44.6

43.4

Minor BPS

44.6

-0.4

55.2

Associated Gene:

Gene:

SIN3A

Ensembl Gene ID:

ENSAPLG00000012706

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013265

9006763 - 9030340

23578