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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9032707_9033436_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9032707 - 9033436

Intron Length:

730

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAGG

5'SS Class:

strong_major

3'SS Sequence:

CCTTCCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAA

U12 Branch Point Sequence:

GTGGGCTGAACG

Flanking Amino Acid:

MVWRDGQPVQGLTKEGEKTS

Intron Amino Acid Position:

118

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.4

43.3

Major BPS

49.7

-0

1.3

43.1

41.8

Major PPT

79.9

0.67

0.7

73.4

24.9

Minor 5ss

31.7

-2.1

3.1

39.7

45.9

Minor BPS

46.8

-0.3

2.1

52.77

47.5

Associated Gene:

Gene:

MAN2C1

Ensembl Gene ID:

ENSAPLG00000012217

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012768

9032066 - 9042690

10625