Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_9034955_9035160_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9034955 - 9035160

Intron Length:

206

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

TGTGCTCTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGAGAC

U12 Branch Point Sequence:

GGAGCTGAGACT

Flanking Amino Acid:

NPEFTFVCSQAQQFEWVRSW

Intron Amino Acid Position:

300

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

80.5

33.9

Major BPS

46.7

-0.2

1.2

41.8

39.2

Major PPT

70.2

0.45

65.7

40.9

Minor 5ss

31.4

-2.1

2.9

42.1

44.5

Minor BPS

39.4

-0.7

2.2

52.54

42.7

Associated Gene:

Gene:

MAN2C1

Ensembl Gene ID:

ENSAPLG00000012217

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012768

9032066 - 9042690

10625