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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9035272_9035622_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9035272 - 9035622

Intron Length:

351

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGAAGT

5'SS Class:

strong_major

3'SS Sequence:

GCTCTGCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTGAT

U12 Branch Point Sequence:

GGTACCTGATGT

Flanking Amino Acid:

IPVGGTWVEMDGNLPGGEAM

Intron Amino Acid Position:

337

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

0.9

73.3

37.3

Major BPS

0.5

59.3

39.1

Major PPT

67.9

0.4

0.9

57.8

38.5

Minor 5ss

29.9

-2.3

37.4

41.2

Minor BPS

45.8

-0.2

63.61

45.7

Associated Gene:

Gene:

MAN2C1

Ensembl Gene ID:

ENSAPLG00000012217

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012768

9032066 - 9042690

10625