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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9037723_9038209_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9037723 - 9038209

Intron Length:

487

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGACTGCG

5'SS Class:

major

3'SS Sequence:

TGGTTGGCACTAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCCTAA

U12 Branch Point Sequence:

ACTTCCTAAGGA

Flanking Amino Acid:

HNGTYTTQAQIKKGNRECEQ

Intron Amino Acid Position:

529

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

1.1

65.8

40.2

Major BPS

59.6

0.24

1.3

58.7

39.9

Major PPT

56.1

0.14

1.1

48.3

44.9

Minor 5ss

33.1

-1.9

3.1

41.3

45.2

Minor BPS

47.5

-0.1

2.1

61.2

45.1

Associated Gene:

Gene:

MAN2C1

Ensembl Gene ID:

ENSAPLG00000012217

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012768

9032066 - 9042690

10625