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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9041068_9041182_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9041068 - 9041182

Intron Length:

115

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAGGA

5'SS Class:

strong_major

3'SS Sequence:

GTGCCTCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCAGAT

U12 Branch Point Sequence:

TGTGGCAGATCT

Flanking Amino Acid:

NTSWDWARFEVWAHKWMDLS

Intron Amino Acid Position:

850

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.8

71.2

34.5

Major BPS

46.5

-0.2

1.3

40.4

42.3

Major PPT

73.1

0.52

0.9

66.1

35.8

Minor 5ss

24.3

-3

3.1

29.7

43.1

Minor BPS

40.4

-0.6

2.3

62.58

46.8

Associated Gene:

Gene:

MAN2C1

Ensembl Gene ID:

ENSAPLG00000012217

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012768

9032066 - 9042690

10625