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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9042200_9042397_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9042200 - 9042397

Intron Length:

198

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCGAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

TGTGTCCCTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAG

U12 Branch Point Sequence:

GTGTCCCTGAAG

Flanking Amino Acid:

PAVVLETVKQAEDRPDALVL

Intron Amino Acid Position:

962

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.3

0.95

0.9

80.1

30.6

Major BPS

43.9

-0.3

1.6

36.8

44.4

Major PPT

65.9

0.36

1.1

65.1

36.7

Minor 5ss

19.7

-3.5

3.4

27.2

36.3

Minor BPS

49.2

-0.2

1.9

57.54

43.7

Associated Gene:

Gene:

MAN2C1

Ensembl Gene ID:

ENSAPLG00000012217

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012768

9032066 - 9042690

10625