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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9044014_9044207_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9044014 - 9044207

Intron Length:

194

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGATGC

5'SS Class:

strong_major

3'SS Sequence:

TCTGTCTGCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCACAT

U12 Branch Point Sequence:

TGCTGCTAAGCC

Flanking Amino Acid:

KADPDAPTAQVTTRASKRRS

Intron Amino Acid Position:

312

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

66.9

Major BPS

62.5

0.31

1.2

38.9

Major PPT

72.4

0.5

41.2

Minor 5ss

36.9

-1.5

3.3

50.4

46.2

Minor BPS

45.4

-0.3

2.2

58.6

46.3

Associated Gene:

Gene:

NEIL1

Ensembl Gene ID:

ENSAPLG00000021670

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036838

9043629 - 9048613

4985