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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9044270_9044601_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9044270 - 9044601

Intron Length:

332

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TCTTCCCATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCCAT

U12 Branch Point Sequence:

TCTCCCCTCACC

Flanking Amino Acid:

QGEPGPMVPGGQKSRKKRAG

Intron Amino Acid Position:

291

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

78.4

29.1

Major BPS

72.3

0.55

1.2

80.7

33.2

Major PPT

79.4

0.66

0.8

74.1

29.9

Minor 5ss

28.5

-2.5

35.5

41.2

Minor BPS

51.8

0.04

2.1

68.8

42.6

Associated Gene:

Gene:

NEIL1

Ensembl Gene ID:

ENSAPLG00000021670

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036838

9043629 - 9048613

4985