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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9046318_9046466_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9046318 - 9046466

Intron Length:

149

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGTGC

5'SS Class:

strong_major

3'SS Sequence:

TGGACTCTCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAC

U12 Branch Point Sequence:

AGGCTTGTGACG

Flanking Amino Acid:

GNYLRAEILYRLKIPPFEKA

Intron Amino Acid Position:

180

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

37.3

Major BPS

71.3

0.53

1.2

63.1

44.5

Major PPT

69.6

0.44

65.8

40.8

Minor 5ss

31.6

-2.1

3.2

41.1

45.6

Minor BPS

41.7

-0.8

1.9

41.72

37.2

Associated Gene:

Gene:

NEIL1

Ensembl Gene ID:

ENSAPLG00000021670

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036838

9043629 - 9048613

4985