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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9056113_9056189_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9056113 - 9056189

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGCT

5'SS Class:

strong_major

3'SS Sequence:

CGTCCCTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAC

U12 Branch Point Sequence:

GCGTCCTGACAC

Flanking Amino Acid:

AVIPIECHYPRRENVSSNAI

Intron Amino Acid Position:

157

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.2

0.95

0.8

79.6

32.5

Major BPS

68.9

0.47

59.2

39.1

Major PPT

69.4

0.44

64.9

36.3

Minor 5ss

31.9

-2.1

3.6

47.6

Minor BPS

46.7

-0.2

1.8

53.19

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012142

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012632

9049271 - 9056905

7635