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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9061348_9062225_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9061348 - 9062225

Intron Length:

878

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGGATG

5'SS Class:

strong_major

3'SS Sequence:

CGTCTCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATGCAT

U12 Branch Point Sequence:

TGGTGGATAATG

Flanking Amino Acid:

GLHECGSTLRVTPDALIYST

Intron Amino Acid Position:

116

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

73.4

43.3

Major BPS

58.4

0.21

1.3

69.4

37.7

Major PPT

74.1

0.54

0.8

65.3

36.2

Minor 5ss

35.4

-1.7

3.2

40.5

45.5

Minor BPS

40.3

-0.8

2.5

48.53

45.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011746

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020043

9059608 - 9062664

3057

ENSAPLT00000012230

9059424 - 9062664

3241