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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9065074_9065511_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9065074 - 9065511

Intron Length:

438

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TTTGCTCCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

CATTTGATAAGA

Flanking Amino Acid:

EEDSVDEDSKDSSLLEGLGN

Intron Amino Acid Position:

792

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.7

80.2

27.1

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

82.8

0.74

0.8

74.1

36.6

Minor 5ss

27.5

-2.6

32.5

42.3

Minor BPS

42.7

-0.5

2.4

56.48

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019404

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030825

9063654 - 9071344

7691

ENSAPLT00000025165

9063654 - 9071492

7839