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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9073369_9073797_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9073369 - 9073797

Intron Length:

429

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCAAGCTGG

5'SS Class:

strong_major

3'SS Sequence:

GCTCGCCACCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCGCCAC

U12 Branch Point Sequence:

AGCTCGCCACCC

Flanking Amino Acid:

QLAAHLLGNRSVPSCAPLPP

Intron Amino Acid Position:

172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.9

64.7

46.7

Major BPS

45.9

-0.2

1.4

52.1

43.1

Major PPT

60.9

0.25

50.6

38.4

Minor 5ss

32.9

-1.9

46.8

48.5

Minor BPS

36.2

-1

2.4

46.37

42.3

Associated Gene:

Gene:

STOML1

Ensembl Gene ID:

ENSAPLG00000011367

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011848

9072401 - 9075372

2972