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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9077936_9078098_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9077936 - 9078098

Intron Length:

163

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ACG|GCCACACCG

5'SS Class:

weak_major

3'SS Sequence:

GAGGGCTGGGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGCTCAC

U12 Branch Point Sequence:

AGTCCCTGGAGG

Flanking Amino Acid:

KSCTLFCSSHGTPRLTLVIY

Intron Amino Acid Position:

171

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.2

0.08

1.4

45.6

43.7

Major BPS

0.28

1.1

63.1

35.8

Major PPT

39.7

-0.6

1.7

31.2

41.6

Minor 5ss

23.4

-3.1

3.7

33.1

41.2

Minor BPS

46.8

-0.3

1.9

52.26

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001026

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001009

9077391 - 9082546

5156

ENSAPLT00000039061

9077391 - 9080286

2896