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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9078949_9079778_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9078949 - 9079778

Intron Length:

830

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGG|GCCAGGGAT

5'SS Class:

major

3'SS Sequence:

CAAGGTGCTGAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CACCCAA

U12 Branch Point Sequence:

CAGGCGTCACCC

Flanking Amino Acid:

RVEAHAGEDLGWSTTPRRIP

Intron Amino Acid Position:

376

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.8

0.49

1.2

68.1

40.2

Major BPS

47.2

-0.1

1.1

32.5

Major PPT

49.1

-0

1.2

41.2

Minor 5ss

15.5

-4

3.8

20.8

37.5

Minor BPS

37.6

-0.9

2.3

42.92

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001026

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039061

9077391 - 9080286

2896