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Intron Name: Anas_platyrhynchos_platyrhynchos_11_9097273_9097451_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9097273 - 9097451

Intron Length:

179

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCCGGCAC

5'SS Class:

major

3'SS Sequence:

CTGTGTCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

TGGCCCCTGACC

Flanking Amino Acid:

LNRGVETFDPGYHAYCHYLK

Intron Amino Acid Position:

567

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.7

0.32

1.4

44.1

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

0.47

0.9

61.9

39.9

Minor 5ss

25.4

-2.8

3.2

32.9

42.2

Minor BPS

54.9

0.14

1.7

65.34

Associated Gene:

Gene:

STRA6

Ensembl Gene ID:

ENSAPLG00000010924

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011393

9096880 - 9108211

11332

ENSAPLT00000038179

9096923 - 9108211

11289